SELECT 
  cscart_product_prices.product_id, 
  MIN(
    IF(
      cscart_product_prices.percentage_discount = 0, 
      cscart_product_prices.price, 
      cscart_product_prices.price - (
        cscart_product_prices.price * cscart_product_prices.percentage_discount
      )/ 100
    )
  ) AS price 
FROM 
  cscart_product_prices 
WHERE 
  cscart_product_prices.product_id IN (
    63045, 63044, 63043, 63042, 63041, 63040, 
    63039, 63038, 63037, 63036, 63035, 
    63034, 63033, 63032, 63031, 63030, 
    63029, 63028, 63027, 63026, 63025, 
    63024, 63023, 63022, 63021
  ) 
  AND cscart_product_prices.lower_limit = 1 
  AND cscart_product_prices.usergroup_id IN (0, 1) 
GROUP BY 
  cscart_product_prices.product_id

Query time 0.00075

Explain
id select_type table type possible_keys key key_len ref rows Extra
1 SIMPLE cscart_product_prices range usergroup,product_id,lower_limit,usergroup_id usergroup 9 50 Using where

Result

product_id price
63021 1.69000000
63022 1.69000000
63023 1.69000000
63024 1.69000000
63025 1.69000000
63026 1.69000000
63027 1.69000000
63028 1.69000000
63029 1.69000000
63030 1.69000000
63031 1.69000000
63032 1.69000000
63033 1.69000000
63034 1.69000000
63035 1.69000000
63036 1.69000000
63037 1.69000000
63038 1.69000000
63039 1.69000000
63040 1.69000000
63041 1.69000000
63042 1.69000000
63043 1.69000000
63044 1.69000000
63045 1.69000000